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Proteomic analysis of Populus × euramericana (clone I-214) roots to identify key factors involved in zinc stress response.

Identifieur interne : 002087 ( Main/Exploration ); précédent : 002086; suivant : 002088

Proteomic analysis of Populus × euramericana (clone I-214) roots to identify key factors involved in zinc stress response.

Auteurs : Stefania Romeo [Italie] ; Dalila Trupiano [Italie] ; Andrea Ariani [Italie] ; Giovanni Renzone [Italie] ; Gabriella S. Scippa [Italie] ; Andrea Scaloni [Italie] ; Luca Sebastiani [Italie]

Source :

RBID : pubmed:24974332

Descripteurs français

English descriptors

Abstract

Contamination of soil and water by heavy metals has become a widespread problem; environmental pollution by high zinc (Zn) concentration occurs frequently. Although poplar (Populus spp.) has been identified as suitable for phytoremediation approaches, its response to high Zn concentrations are still not clearly understood. For this reason, we investigated the effects of Zn in Populus×euramericana clone I-214 roots by proteomic analysis. Comparative experiments were conducted on rooted woody cuttings grown in nutrient solutions containing 1mM (treatment) or 1μM (control) Zn concentrations. A gel-based proteomic approach coupled with morphological and chemical analysis was used to identify differentially represented proteins in treated roots and to investigate the effect of Zn treatment on the poplar root system. Data shows that Zn was accumulated preferentially in roots, that the antioxidant system, the carbohydrate/energy and amino acid metabolisms were the main pathways modulated by Zn excess, and that mitochondria and vacuoles were the cellular organelles predominately affected by Zn stress. A coordination between cell death and proliferation/growth seems to occur under this condition to counteract the Zn-induced damage.

DOI: 10.1016/j.jplph.2014.03.016
PubMed: 24974332


Affiliations:


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Le document en format XML

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<term>Free Radical Scavengers (metabolism)</term>
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<div type="abstract" xml:lang="en">Contamination of soil and water by heavy metals has become a widespread problem; environmental pollution by high zinc (Zn) concentration occurs frequently. Although poplar (Populus spp.) has been identified as suitable for phytoremediation approaches, its response to high Zn concentrations are still not clearly understood. For this reason, we investigated the effects of Zn in Populus×euramericana clone I-214 roots by proteomic analysis. Comparative experiments were conducted on rooted woody cuttings grown in nutrient solutions containing 1mM (treatment) or 1μM (control) Zn concentrations. A gel-based proteomic approach coupled with morphological and chemical analysis was used to identify differentially represented proteins in treated roots and to investigate the effect of Zn treatment on the poplar root system. Data shows that Zn was accumulated preferentially in roots, that the antioxidant system, the carbohydrate/energy and amino acid metabolisms were the main pathways modulated by Zn excess, and that mitochondria and vacuoles were the cellular organelles predominately affected by Zn stress. A coordination between cell death and proliferation/growth seems to occur under this condition to counteract the Zn-induced damage. </div>
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<DescriptorName UI="D003433" MajorTopicYN="Y">Crosses, Genetic</DescriptorName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D015180" MajorTopicYN="N">Electrophoresis, Gel, Two-Dimensional</DescriptorName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D004734" MajorTopicYN="N">Energy Metabolism</DescriptorName>
<QualifierName UI="Q000187" MajorTopicYN="N">drug effects</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D016166" MajorTopicYN="N">Free Radical Scavengers</DescriptorName>
<QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D006706" MajorTopicYN="N">Homeostasis</DescriptorName>
<QualifierName UI="Q000187" MajorTopicYN="N">drug effects</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D008928" MajorTopicYN="N">Mitochondria</DescriptorName>
<QualifierName UI="Q000187" MajorTopicYN="N">drug effects</QualifierName>
<QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D018515" MajorTopicYN="N">Plant Leaves</DescriptorName>
<QualifierName UI="Q000187" MajorTopicYN="N">drug effects</QualifierName>
<QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D010940" MajorTopicYN="N">Plant Proteins</DescriptorName>
<QualifierName UI="Q000145" MajorTopicYN="N">classification</QualifierName>
<QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D018517" MajorTopicYN="N">Plant Roots</DescriptorName>
<QualifierName UI="Q000187" MajorTopicYN="N">drug effects</QualifierName>
<QualifierName UI="Q000254" MajorTopicYN="N">growth & development</QualifierName>
<QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D018547" MajorTopicYN="N">Plant Stems</DescriptorName>
<QualifierName UI="Q000187" MajorTopicYN="N">drug effects</QualifierName>
<QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D032107" MajorTopicYN="N">Populus</DescriptorName>
<QualifierName UI="Q000187" MajorTopicYN="N">drug effects</QualifierName>
<QualifierName UI="Q000254" MajorTopicYN="N">growth & development</QualifierName>
<QualifierName UI="Q000378" MajorTopicYN="Y">metabolism</QualifierName>
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<DescriptorName UI="D020543" MajorTopicYN="N">Proteome</DescriptorName>
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<MeshHeading>
<DescriptorName UI="D040901" MajorTopicYN="N">Proteomics</DescriptorName>
<QualifierName UI="Q000379" MajorTopicYN="Y">methods</QualifierName>
</MeshHeading>
<MeshHeading>
<DescriptorName UI="D017382" MajorTopicYN="N">Reactive Oxygen Species</DescriptorName>
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<QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName>
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<MeshHeading>
<DescriptorName UI="D015032" MajorTopicYN="N">Zinc</DescriptorName>
<QualifierName UI="Q000633" MajorTopicYN="Y">toxicity</QualifierName>
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</MeshHeadingList>
<KeywordList Owner="NOTNLM">
<Keyword MajorTopicYN="N">Mitochondrial homeostasis</Keyword>
<Keyword MajorTopicYN="N">Poplar</Keyword>
<Keyword MajorTopicYN="N">Root proliferation</Keyword>
<Keyword MajorTopicYN="N">Vacuolar dysfunction</Keyword>
<Keyword MajorTopicYN="N">Zn</Keyword>
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</MedlineCitation>
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<PubMedPubDate PubStatus="received">
<Year>2014</Year>
<Month>02</Month>
<Day>06</Day>
</PubMedPubDate>
<PubMedPubDate PubStatus="revised">
<Year>2014</Year>
<Month>03</Month>
<Day>20</Day>
</PubMedPubDate>
<PubMedPubDate PubStatus="accepted">
<Year>2014</Year>
<Month>03</Month>
<Day>23</Day>
</PubMedPubDate>
<PubMedPubDate PubStatus="entrez">
<Year>2014</Year>
<Month>6</Month>
<Day>30</Day>
<Hour>6</Hour>
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<PubMedPubDate PubStatus="pubmed">
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<Day>30</Day>
<Hour>6</Hour>
<Minute>0</Minute>
</PubMedPubDate>
<PubMedPubDate PubStatus="medline">
<Year>2015</Year>
<Month>2</Month>
<Day>13</Day>
<Hour>6</Hour>
<Minute>0</Minute>
</PubMedPubDate>
</History>
<PublicationStatus>ppublish</PublicationStatus>
<ArticleIdList>
<ArticleId IdType="pubmed">24974332</ArticleId>
<ArticleId IdType="pii">S0176-1617(14)00088-1</ArticleId>
<ArticleId IdType="doi">10.1016/j.jplph.2014.03.016</ArticleId>
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</PubmedData>
</pubmed>
<affiliations>
<list>
<country>
<li>Italie</li>
</country>
<region>
<li>Toscane</li>
</region>
<settlement>
<li>Pise</li>
</settlement>
</list>
<tree>
<country name="Italie">
<region name="Toscane">
<name sortKey="Romeo, Stefania" sort="Romeo, Stefania" uniqKey="Romeo S" first="Stefania" last="Romeo">Stefania Romeo</name>
</region>
<name sortKey="Ariani, Andrea" sort="Ariani, Andrea" uniqKey="Ariani A" first="Andrea" last="Ariani">Andrea Ariani</name>
<name sortKey="Renzone, Giovanni" sort="Renzone, Giovanni" uniqKey="Renzone G" first="Giovanni" last="Renzone">Giovanni Renzone</name>
<name sortKey="Scaloni, Andrea" sort="Scaloni, Andrea" uniqKey="Scaloni A" first="Andrea" last="Scaloni">Andrea Scaloni</name>
<name sortKey="Scippa, Gabriella S" sort="Scippa, Gabriella S" uniqKey="Scippa G" first="Gabriella S" last="Scippa">Gabriella S. Scippa</name>
<name sortKey="Sebastiani, Luca" sort="Sebastiani, Luca" uniqKey="Sebastiani L" first="Luca" last="Sebastiani">Luca Sebastiani</name>
<name sortKey="Trupiano, Dalila" sort="Trupiano, Dalila" uniqKey="Trupiano D" first="Dalila" last="Trupiano">Dalila Trupiano</name>
</country>
</tree>
</affiliations>
</record>

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